Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC138649.4-201ENST00000612222 287 ntBASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 AP001059.3-201ENST00000619053 235 ntBASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC163A0A0D9SF12 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 DUX4L27-201ENST00000554796 1261 ntBASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 AC099522.2-201ENST00000607001 744 ntBASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC163A0A0D9SF12 AKAP8P1-201ENST00000434743 1349 ntBASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 AC100803.2-201ENST00000562459 1963 ntBASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 AL592309.1-201ENST00000443127 649 ntBASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC163A0A0D9SF12 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 AC116562.4-201ENST00000641316 2276 ntBASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC163A0A0D9SF12 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms