Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 AL662844.1-201ENST00000546340 181 ntBASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 NKAPP1-205ENST00000585790 367 ntBASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 AL139327.4-201ENST00000612362 153 ntBASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 AL022326.1-202ENST00000641533 845 ntBASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 AC012317.2-201ENST00000623305 2251 ntBASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNMT3AQ9Y6K1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 AC009336.1-201ENST00000608941 1553 ntBASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 FAM197Y8-203ENST00000450145 560 ntBASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 AP002469.2-201ENST00000531724 424 ntBASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.19■□□□□ 0.34
DNMT3AQ9Y6K1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 AF186996.4-201ENST00000467186 377 ntBASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 AC073648.2-201ENST00000510116 352 ntBASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 SART3-203ENST00000546611 1184 ntBASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 AL121894.2-201ENST00000602977 491 ntBASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.18■□□□□ 0.34
DNMT3AQ9Y6K1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms