Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 AC011467.2-201ENST00000598425 242 ntBASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 AF228730.7-201ENST00000641842 219 ntBASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 FLJ13224-201ENST00000313737 1514 ntBASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 INTS4P1-201ENST00000438455 1935 ntBASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA6Q9Y5G7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 MIR574-201ENST00000385209 96 ntBASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 SCARNA2-201ENST00000458748 420 ntBASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 AC108860.2-201ENST00000562760 2183 ntBASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 AC099343.3-201ENST00000605834 2503 ntBASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA6Q9Y5G7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 KRT18P65-201ENST00000439811 1286 ntBASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 RNPS1P1-201ENST00000507437 918 ntBASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 AC073648.2-201ENST00000510116 352 ntBASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 AC148477.8-201ENST00000624298 468 ntBASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 AC125634.1-201ENST00000438758 1403 ntBASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA6Q9Y5G7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA6Q9Y5G7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms