Protein–RNA interactions for Protein: Q9Y4A5

TRRAP, Transformation/transcription domain-associated protein, humanhuman

Predictions only

Length 3,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAPQ9Y4A5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 AC112191.1-201ENST00000523689 701 ntBASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 AC116407.2-201ENST00000613639 860 ntBASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 IGHV3-72-202ENST00000621503 303 ntBASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRRAPQ9Y4A5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 AP000997.3-201ENST00000623333 2250 ntBASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 IGHV3-71-201ENST00000523324 359 ntBASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 AC104581.1-202ENST00000635932 2618 ntBASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 AL390754.1-201ENST00000619088 582 ntBASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
TRRAPQ9Y4A5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AC109462.3-201ENST00000573934 613 ntBASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AL138828.2-201ENST00000615812 383 ntBASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 CU639417.3-201ENST00000624240 1404 ntBASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 GGTLC5P-201ENST00000617623 998 ntBASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 CXCL1P1-201ENST00000502804 216 ntBASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 SPTSSB-204ENST00000617024 1292 ntBASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 AC093010.1-201ENST00000473625 1624 ntBASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRRAPQ9Y4A5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRRAPQ9Y4A5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRRAPQ9Y4A5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.16□□□□□ -0.3
TRRAPQ9Y4A5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.16□□□□□ -0.3
TRRAPQ9Y4A5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRRAPQ9Y4A5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms