Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 AC239809.2-201ENST00000415381 517 ntBASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 KRT17P3-201ENST00000420566 1262 ntBASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 AL138781.1-201ENST00000566567 1274 ntBASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 MIR3180-4-201ENST00000582223 153 ntBASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 AL513477.1-201ENST00000602865 2407 ntBASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.06■□□□□ 0.16
TPRKBQ9Y3C4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 MST1L-201ENST00000442552 2185 ntBASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 AL023875.1-201ENST00000640777 796 ntBASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 AC068587.6-202ENST00000641839 5619 ntBASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRKBQ9Y3C4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 AC092068.3-201ENST00000587894 2016 ntBASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 AC069544.1-201ENST00000609399 999 ntBASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 LYSMD4-203ENST00000378904 2122 ntBASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRKBQ9Y3C4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.03■□□□□ 0.16
TPRKBQ9Y3C4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.03■□□□□ 0.16
TPRKBQ9Y3C4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPRKBQ9Y3C4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPRKBQ9Y3C4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPRKBQ9Y3C4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TPRKBQ9Y3C4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPRKBQ9Y3C4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPRKBQ9Y3C4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms