Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 AC002310.6-201ENST00000624451 1377 ntBASIC23.88■■□□□ 1.41
NINLQ9Y2I6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 MRPL20P1-201ENST00000400819 433 ntBASIC23.88■■□□□ 1.41
NINLQ9Y2I6 PTCHD3P3-201ENST00000403073 906 ntBASIC23.88■■□□□ 1.41
NINLQ9Y2I6 VN2R19P-201ENST00000442399 1052 ntBASIC23.88■■□□□ 1.41
NINLQ9Y2I6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NINLQ9Y2I6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 YBX2P1-201ENST00000394192 760 ntBASIC23.87■■□□□ 1.41
NINLQ9Y2I6 IGLL3P-201ENST00000412472 434 ntBASIC23.87■■□□□ 1.41
NINLQ9Y2I6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NINLQ9Y2I6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 DNAJB3-201ENST00000446806 729 ntBASIC23.86■■□□□ 1.41
NINLQ9Y2I6 CYMP-203ENST00000474680 1263 ntBASIC23.86■■□□□ 1.41
NINLQ9Y2I6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
NINLQ9Y2I6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 CALY-203ENST00000368558 825 ntTSL 5 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 CRYGEP-201ENST00000412192 528 ntBASIC23.85■■□□□ 1.41
NINLQ9Y2I6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NINLQ9Y2I6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 AC133963.1-201ENST00000504166 1679 ntBASIC23.84■■□□□ 1.41
NINLQ9Y2I6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NINLQ9Y2I6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms