Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AMT-250ENST00000637682 1823 ntTSL 5 BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CDK11AQ9UQ88 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 AC004449.1-201ENST00000564240 433 ntBASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC26.92■■□□□ 1.9
CDK11AQ9UQ88 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 AL513480.1-201ENST00000451731 511 ntBASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 SPCS2P1-201ENST00000561636 679 ntBASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 AL135999.2-201ENST00000622438 1686 ntBASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDK11AQ9UQ88 AC046185.3-201ENST00000623228 1824 ntBASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 AC006116.8-202ENST00000587620 1550 ntBASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 RPL28-205ENST00000558131 444 ntTSL 5 BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 STK4-201ENST00000372801 2038 ntTSL 2 BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 FLJ13224-201ENST00000313737 1514 ntBASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 AC129492.6-201ENST00000611383 1305 ntBASIC26.9■■□□□ 1.9
CDK11AQ9UQ88 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 CBR1-202ENST00000399191 838 ntTSL 3 BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 FALEC-201ENST00000416894 566 ntTSL 3 BASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 AC023141.5-201ENST00000458585 616 ntBASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 AC025678.2-201ENST00000562061 970 ntBASIC26.89■■□□□ 1.9
CDK11AQ9UQ88 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC26.89■■□□□ 1.89
CDK11AQ9UQ88 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.89
CDK11AQ9UQ88 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CDK11AQ9UQ88 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
CDK11AQ9UQ88 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
CDK11AQ9UQ88 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 AC092919.2-201ENST00000623631 1645 ntBASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 ADH5P3-201ENST00000433842 1137 ntBASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 MNT-208ENST00000575394 606 ntTSL 4 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 USP49-202ENST00000373010 2446 ntTSL 5 BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CDK11AQ9UQ88 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms