Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 AC133963.1-201ENST00000504166 1679 ntBASIC18.53■□□□□ 0.56
CDH9Q9ULB4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH9Q9ULB4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.52■□□□□ 0.56
CDH9Q9ULB4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDH9Q9ULB4 AL355312.1-201ENST00000407115 2176 ntBASIC18.52■□□□□ 0.56
CDH9Q9ULB4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.52■□□□□ 0.55
CDH9Q9ULB4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH9Q9ULB4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.52■□□□□ 0.55
CDH9Q9ULB4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH9Q9ULB4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CDH9Q9ULB4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH9Q9ULB4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH9Q9ULB4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.55
CDH9Q9ULB4 AC046185.3-201ENST00000623228 1824 ntBASIC18.51■□□□□ 0.55
CDH9Q9ULB4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 AL022342.1-201ENST00000400363 863 ntBASIC18.51■□□□□ 0.55
CDH9Q9ULB4 KRT18P27-201ENST00000427733 1299 ntBASIC18.51■□□□□ 0.55
CDH9Q9ULB4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 AC004706.3-202ENST00000621574 984 ntBASIC18.51■□□□□ 0.55
CDH9Q9ULB4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH9Q9ULB4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 AC097637.2-201ENST00000624096 1997 ntBASIC18.5■□□□□ 0.55
CDH9Q9ULB4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 AC092910.1-201ENST00000482027 1129 ntBASIC18.5■□□□□ 0.55
CDH9Q9ULB4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH9Q9ULB4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH9Q9ULB4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.49■□□□□ 0.55
CDH9Q9ULB4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms