Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL4Q9UJQ4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 PCDH8P1-201ENST00000428983 2773 ntBASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 IGHGP-201ENST00000390555 1178 ntBASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 AL121956.5-201ENST00000625261 221 ntBASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 RNF216P1-203ENST00000404404 2427 ntBASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SALL4Q9UJQ4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SALL4Q9UJQ4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SALL4Q9UJQ4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SALL4Q9UJQ4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SALL4Q9UJQ4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 MTCL1P1-201ENST00000446207 792 ntBASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 AP000550.4-202ENST00000639755 178 ntBASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 AC010460.3-201ENST00000511359 1579 ntBASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL4Q9UJQ4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 AC096633.1-201ENST00000422446 749 ntBASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SALL4Q9UJQ4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms