Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 RPL13AP23-201ENST00000480739 586 ntBASIC18.85■□□□□ 0.61
CNTN3Q9P232 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 AL356488.2-201ENST00000602755 427 ntBASIC18.85■□□□□ 0.61
CNTN3Q9P232 AL139327.4-201ENST00000612362 153 ntBASIC18.85■□□□□ 0.61
CNTN3Q9P232 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 AC117500.6-201ENST00000624871 588 ntBASIC18.85■□□□□ 0.61
CNTN3Q9P232 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 AC020916.1-201ENST00000587762 1774 ntBASIC18.85■□□□□ 0.61
CNTN3Q9P232 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
CNTN3Q9P232 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTN3Q9P232 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNTN3Q9P232 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CNTN3Q9P232 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.83■□□□□ 0.61
CNTN3Q9P232 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTN3Q9P232 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.83■□□□□ 0.61
CNTN3Q9P232 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.83■□□□□ 0.61
CNTN3Q9P232 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTN3Q9P232 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTN3Q9P232 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTN3Q9P232 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTN3Q9P232 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTN3Q9P232 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNTN3Q9P232 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.83■□□□□ 0.61
CNTN3Q9P232 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
CNTN3Q9P232 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNTN3Q9P232 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTN3Q9P232 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNTN3Q9P232 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 AC136632.2-201ENST00000512891 861 ntBASIC18.83■□□□□ 0.6
CNTN3Q9P232 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 AL139424.1-201ENST00000607572 797 ntBASIC18.83■□□□□ 0.6
CNTN3Q9P232 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNTN3Q9P232 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTN3Q9P232 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNTN3Q9P232 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTN3Q9P232 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNTN3Q9P232 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNTN3Q9P232 AC097637.2-201ENST00000624096 1997 ntBASIC18.82■□□□□ 0.6
CNTN3Q9P232 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.82■□□□□ 0.6
CNTN3Q9P232 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNTN3Q9P232 AC046185.3-201ENST00000623228 1824 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms