Protein–RNA interactions for Protein: Q9NZZ3

CHMP5, Charged multivesicular body protein 5, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5Q9NZZ3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 AL355802.2-201ENST00000402069 882 ntBASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 NUDT16P1-203ENST00000513809 620 ntBASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHMP5Q9NZZ3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.7■□□□□ 0.91
CHMP5Q9NZZ3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CHMP5Q9NZZ3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CHMP5Q9NZZ3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 AL139327.4-201ENST00000612362 153 ntBASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP5Q9NZZ3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 TSPY17P-201ENST00000450329 467 ntBASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 AC007950.2-201ENST00000615045 2347 ntBASIC20.69■□□□□ 0.9
CHMP5Q9NZZ3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms