Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 GNAS-203ENST00000306120 1878 ntBASIC21.09■□□□□ 0.97
SALL1Q9NSC2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SALL1Q9NSC2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 AC108073.2-201ENST00000464002 357 ntBASIC21.08■□□□□ 0.97
SALL1Q9NSC2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 AC064836.3-201ENST00000607928 673 ntBASIC21.08■□□□□ 0.97
SALL1Q9NSC2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SALL1Q9NSC2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SALL1Q9NSC2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SALL1Q9NSC2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SALL1Q9NSC2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SALL1Q9NSC2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 AC097637.2-201ENST00000624096 1997 ntBASIC21.07■□□□□ 0.96
SALL1Q9NSC2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 LINC00896-202ENST00000609602 2128 ntBASIC21.07■□□□□ 0.96
SALL1Q9NSC2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.07■□□□□ 0.96
SALL1Q9NSC2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 LINC00982-205ENST00000420957 435 ntBASIC21.06■□□□□ 0.96
SALL1Q9NSC2 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.06■□□□□ 0.96
SALL1Q9NSC2 ACTG1P4-201ENST00000425123 1122 ntBASIC21.06■□□□□ 0.96
SALL1Q9NSC2 AC004832.2-201ENST00000426397 482 ntBASIC21.06■□□□□ 0.96
SALL1Q9NSC2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.06■□□□□ 0.96
SALL1Q9NSC2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 YBX2P1-201ENST00000394192 760 ntBASIC21.05■□□□□ 0.96
SALL1Q9NSC2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 MIR1233-2-201ENST00000408138 82 ntBASIC21.05■□□□□ 0.96
SALL1Q9NSC2 MIR1233-1-201ENST00000408722 82 ntBASIC21.05■□□□□ 0.96
SALL1Q9NSC2 PRSS29P-201ENST00000440800 595 ntBASIC21.05■□□□□ 0.96
SALL1Q9NSC2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms