Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SIRPAP1-201ENST00000448467 1770 ntBASIC19.57■□□□□ 0.72
PDLIM7Q9NR12 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 AL139400.1-201ENST00000366220 510 ntBASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 PRSS29P-201ENST00000440800 595 ntBASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 AL096865.1-201ENST00000606796 927 ntBASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 REXO1L11P-201ENST00000620964 1927 ntBASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PDLIM7Q9NR12 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 AC008764.6-201ENST00000595909 2069 ntBASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 IGHV3-65-201ENST00000523210 341 ntBASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.55■□□□□ 0.72
PDLIM7Q9NR12 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.54■□□□□ 0.72
PDLIM7Q9NR12 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 IGLL3P-201ENST00000412472 434 ntBASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 PDPK2P-202ENST00000562415 1191 ntBASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM7Q9NR12 AC008667.4-201ENST00000607370 168 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms