Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.86■□□□□ 0.29
NECTIN3Q9NQS3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 AC112698.1-201ENST00000510299 916 ntBASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 DUTP2-201ENST00000519164 463 ntBASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 AL353801.3-201ENST00000609898 542 ntBASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NECTIN3Q9NQS3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NECTIN3Q9NQS3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.83■□□□□ 0.29
NECTIN3Q9NQS3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NECTIN3Q9NQS3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NECTIN3Q9NQS3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NECTIN3Q9NQS3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 KRT17P6-201ENST00000453795 1220 ntBASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms