Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 AC011676.5-201ENST00000624864 2660 ntBASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 AC084018.2-201ENST00000613093 2607 ntBASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 NKILA-202ENST00000614771 2598 ntBASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NLRC4Q9NPP4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 AC063952.2-201ENST00000498792 1227 ntBASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 AC010460.3-201ENST00000511359 1579 ntBASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NLRC4Q9NPP4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 AC096633.1-201ENST00000422446 749 ntBASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 RN7SL850P-201ENST00000579959 291 ntBASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
NLRC4Q9NPP4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 AC022616.7-201ENST00000525383 220 ntBASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NLRC4Q9NPP4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms