Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 AL121912.1-201ENST00000603683 238 ntBASIC18.49■□□□□ 0.55
CD248Q9HCU0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.49■□□□□ 0.55
CD248Q9HCU0 AC004263.2-201ENST00000617183 678 ntBASIC18.49■□□□□ 0.55
CD248Q9HCU0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CD248Q9HCU0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD248Q9HCU0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 MRPL3P1-201ENST00000400109 1033 ntBASIC18.48■□□□□ 0.55
CD248Q9HCU0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.48■□□□□ 0.55
CD248Q9HCU0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD248Q9HCU0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CD248Q9HCU0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CD248Q9HCU0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.47■□□□□ 0.55
CD248Q9HCU0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CD248Q9HCU0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.47■□□□□ 0.55
CD248Q9HCU0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.47■□□□□ 0.55
CD248Q9HCU0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.47■□□□□ 0.55
CD248Q9HCU0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 LINC01711-201ENST00000598340 967 ntBASIC18.47■□□□□ 0.55
CD248Q9HCU0 REXO1L6P-202ENST00000619970 1078 ntBASIC18.47■□□□□ 0.55
CD248Q9HCU0 AC083906.6-201ENST00000641366 219 ntBASIC18.47■□□□□ 0.55
CD248Q9HCU0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CD248Q9HCU0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD248Q9HCU0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CD248Q9HCU0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD248Q9HCU0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms