Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 AL135999.2-201ENST00000622438 1686 ntBASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 TNXA-203ENST00000507684 2038 ntBASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 AC092919.2-201ENST00000623631 1645 ntBASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 AL138781.2-201ENST00000617896 1843 ntBASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.67■□□□□ 0.9
TDRD3Q9H7E2 REXO1L11P-201ENST00000620964 1927 ntBASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 FAM185BP-201ENST00000443595 716 ntBASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TDRD3Q9H7E2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 AC004461.1-201ENST00000412461 403 ntBASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 MIR3197-201ENST00000582241 73 ntBASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 AC068137.2-201ENST00000605408 478 ntBASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 AL513210.1-201ENST00000629608 234 ntBASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 AC105339.1-204ENST00000636249 355 ntBASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TDRD3Q9H7E2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms