Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 AC100803.2-201ENST00000562459 1963 ntBASIC16.74■□□□□ 0.27
VCX3BQ9H321 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VCX3BQ9H321 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
VCX3BQ9H321 TCAF2P1-201ENST00000291129 2421 ntBASIC16.74■□□□□ 0.27
VCX3BQ9H321 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VCX3BQ9H321 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.73■□□□□ 0.27
VCX3BQ9H321 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.72■□□□□ 0.27
VCX3BQ9H321 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 AC116353.5-201ENST00000638148 1699 ntBASIC16.72■□□□□ 0.27
VCX3BQ9H321 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VCX3BQ9H321 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VCX3BQ9H321 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms