Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AL158212.4-201ENST00000624062 1286 ntBASIC19.65■□□□□ 0.74
RNF39Q9H2S5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF39Q9H2S5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF39Q9H2S5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF39Q9H2S5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF39Q9H2S5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AKR1C7P-201ENST00000305623 895 ntBASIC19.64■□□□□ 0.73
RNF39Q9H2S5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 TPT1P4-201ENST00000403538 519 ntBASIC19.64■□□□□ 0.73
RNF39Q9H2S5 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 FAM204CP-201ENST00000424489 642 ntBASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AL512326.1-201ENST00000443050 721 ntBASIC19.64■□□□□ 0.73
RNF39Q9H2S5 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AL589765.6-201ENST00000601909 549 ntBASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AC245519.2-201ENST00000633673 475 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AC119674.1-217ENST00000641942 1086 ntBASIC19.64■□□□□ 0.73
RNF39Q9H2S5 AC123912.3-201ENST00000600907 1367 ntBASIC19.64■□□□□ 0.73
RNF39Q9H2S5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF39Q9H2S5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 BTBD7P2-201ENST00000441962 620 ntBASIC19.63■□□□□ 0.73
RNF39Q9H2S5 RSL24D1P3-201ENST00000449255 495 ntBASIC19.63■□□□□ 0.73
RNF39Q9H2S5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 CDH13-207ENST00000565636 810 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.63■□□□□ 0.73
RNF39Q9H2S5 AC069234.5-201ENST00000611056 416 ntBASIC19.63■□□□□ 0.73
RNF39Q9H2S5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 AC044839.1-208ENST00000634902 917 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF39Q9H2S5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF39Q9H2S5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF39Q9H2S5 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF39Q9H2S5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF39Q9H2S5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF39Q9H2S5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF39Q9H2S5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF39Q9H2S5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF39Q9H2S5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms