Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCSER1Q9C0I3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 BCL2-203ENST00000589955 5011 ntBASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 AC003669.1-201ENST00000334569 611 ntBASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 STK19B-204ENST00000512515 211 ntBASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 AP000867.4-201ENST00000641616 219 ntBASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.61■□□□□ 0.73
CCSER1Q9C0I3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 MIR5100-201ENST00000579544 119 ntBASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 AC073592.5-201ENST00000624854 528 ntBASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CCSER1Q9C0I3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCSER1Q9C0I3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CCSER1Q9C0I3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms