Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 MIR6821-201ENST00000617625 74 ntBASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMIM3Q9BZL3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 AC092171.3-201ENST00000610122 2651 ntBASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 CKBP1-201ENST00000565489 1086 ntBASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 GPAT2P1-201ENST00000444924 1672 ntBASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.38□□□□□ -0.11
SMIM3Q9BZL3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMIM3Q9BZL3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms