Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 AC011506.1-201ENST00000474329 610 ntBASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 AC104771.1-201ENST00000603335 964 ntBASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 AP000692.2-201ENST00000608391 879 ntBASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSBP4Q9BWG4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 AC060834.1-201ENST00000443027 2032 ntBASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 AC036111.1-201ENST00000533973 1582 ntBASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 B3GAT3P1-201ENST00000471720 806 ntBASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 RN7SL471P-201ENST00000580476 299 ntBASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 MIR6786-201ENST00000616843 113 ntBASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP4Q9BWG4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP4Q9BWG4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms