Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 LINC00167-201ENST00000530583 1419 ntBASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 STARP1-201ENST00000397973 869 ntBASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 AC006011.2-201ENST00000621313 1158 ntBASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHRDL1Q9BU40 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 AC108860.2-201ENST00000562760 2183 ntBASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 AC024563.2-201ENST00000603282 481 ntBASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 KRT18P55-202ENST00000578578 1546 ntBASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CHRDL1Q9BU40 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRDL1Q9BU40 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms