Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 PP12613-201ENST00000424958 2230 ntBASIC14.52□□□□□ -0.08
S1PR3Q99500 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
S1PR3Q99500 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
S1PR3Q99500 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.52□□□□□ -0.09
S1PR3Q99500 AL031133.1-201ENST00000406807 723 ntBASIC14.52□□□□□ -0.09
S1PR3Q99500 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.52□□□□□ -0.09
S1PR3Q99500 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
S1PR3Q99500 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.52□□□□□ -0.09
S1PR3Q99500 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.52□□□□□ -0.09
S1PR3Q99500 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.52□□□□□ -0.09
S1PR3Q99500 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.52□□□□□ -0.09
S1PR3Q99500 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.52□□□□□ -0.09
S1PR3Q99500 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.52□□□□□ -0.09
S1PR3Q99500 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
S1PR3Q99500 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
S1PR3Q99500 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.52□□□□□ -0.09
S1PR3Q99500 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.52□□□□□ -0.09
S1PR3Q99500 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
S1PR3Q99500 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
S1PR3Q99500 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.52□□□□□ -0.09
S1PR3Q99500 AC106820.2-201ENST00000563775 3264 ntBASIC14.52□□□□□ -0.09
S1PR3Q99500 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
S1PR3Q99500 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.52□□□□□ -0.09
S1PR3Q99500 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
S1PR3Q99500 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
S1PR3Q99500 HLA-J-201ENST00000462773 1622 ntBASIC14.52□□□□□ -0.09
S1PR3Q99500 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
S1PR3Q99500 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 AC108860.2-201ENST00000562760 2183 ntBASIC14.51□□□□□ -0.09
S1PR3Q99500 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
S1PR3Q99500 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
S1PR3Q99500 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
S1PR3Q99500 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.51□□□□□ -0.09
S1PR3Q99500 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
S1PR3Q99500 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
S1PR3Q99500 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.51□□□□□ -0.09
S1PR3Q99500 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.51□□□□□ -0.09
S1PR3Q99500 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.51□□□□□ -0.09
S1PR3Q99500 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.51□□□□□ -0.09
S1PR3Q99500 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.51□□□□□ -0.09
S1PR3Q99500 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 VENTXP5-201ENST00000523979 775 ntBASIC14.51□□□□□ -0.09
S1PR3Q99500 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.51□□□□□ -0.09
S1PR3Q99500 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.51□□□□□ -0.09
S1PR3Q99500 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.51□□□□□ -0.09
S1PR3Q99500 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
S1PR3Q99500 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
S1PR3Q99500 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
S1PR3Q99500 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
S1PR3Q99500 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
S1PR3Q99500 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.5□□□□□ -0.09
S1PR3Q99500 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
S1PR3Q99500 KRT8P47-201ENST00000604727 1398 ntBASIC14.5□□□□□ -0.09
S1PR3Q99500 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
S1PR3Q99500 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
S1PR3Q99500 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.5□□□□□ -0.09
S1PR3Q99500 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 AC005332.3-201ENST00000589904 676 ntBASIC14.5□□□□□ -0.09
S1PR3Q99500 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.5□□□□□ -0.09
S1PR3Q99500 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.5□□□□□ -0.09
S1PR3Q99500 AL121956.5-201ENST00000625261 221 ntBASIC14.5□□□□□ -0.09
S1PR3Q99500 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
S1PR3Q99500 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
S1PR3Q99500 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
S1PR3Q99500 LINC00304-203ENST00000565008 1864 ntBASIC14.5□□□□□ -0.09
S1PR3Q99500 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms