Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CASD1Q96PB1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.61■□□□□ 0.57
CASD1Q96PB1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 AP000344.2-201ENST00000512987 629 ntBASIC18.6■□□□□ 0.57
CASD1Q96PB1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 ACTL9-202ENST00000612068 1252 ntBASIC18.6■□□□□ 0.57
CASD1Q96PB1 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 AC104581.1-202ENST00000635932 2618 ntBASIC18.6■□□□□ 0.57
CASD1Q96PB1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 AC009113.1-201ENST00000570267 2443 ntBASIC18.6■□□□□ 0.57
CASD1Q96PB1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CASD1Q96PB1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.6■□□□□ 0.57
CASD1Q96PB1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 AC068137.2-201ENST00000605408 478 ntBASIC18.59■□□□□ 0.57
CASD1Q96PB1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 AL139327.4-201ENST00000612362 153 ntBASIC18.59■□□□□ 0.57
CASD1Q96PB1 AC004408.2-201ENST00000623613 2777 ntBASIC18.59■□□□□ 0.57
CASD1Q96PB1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CASD1Q96PB1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CASD1Q96PB1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CASD1Q96PB1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CASD1Q96PB1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.58■□□□□ 0.57
CASD1Q96PB1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.58■□□□□ 0.57
CASD1Q96PB1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASD1Q96PB1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASD1Q96PB1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASD1Q96PB1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASD1Q96PB1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 SLC25A6P2-201ENST00000497974 877 ntBASIC18.58■□□□□ 0.56
CASD1Q96PB1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CASD1Q96PB1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CASD1Q96PB1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CASD1Q96PB1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CASD1Q96PB1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASD1Q96PB1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASD1Q96PB1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CASD1Q96PB1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CASD1Q96PB1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.57■□□□□ 0.56
CASD1Q96PB1 AC092919.2-201ENST00000623631 1645 ntBASIC18.57■□□□□ 0.56
CASD1Q96PB1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.57■□□□□ 0.56
CASD1Q96PB1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CASD1Q96PB1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASD1Q96PB1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASD1Q96PB1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CASD1Q96PB1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CASD1Q96PB1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CASD1Q96PB1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms