Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NLRP3Q96P20 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.55■■□□□ 1.04
NLRP3Q96P20 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 AL135999.2-201ENST00000622438 1686 ntBASIC21.54■■□□□ 1.04
NLRP3Q96P20 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 AC068137.2-201ENST00000605408 478 ntBASIC21.54■■□□□ 1.04
NLRP3Q96P20 AC106028.4-201ENST00000614509 607 ntBASIC21.54■■□□□ 1.04
NLRP3Q96P20 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 AL138781.2-201ENST00000617896 1843 ntBASIC21.54■■□□□ 1.04
NLRP3Q96P20 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NLRP3Q96P20 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.54■■□□□ 1.04
NLRP3Q96P20 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 AC046185.3-201ENST00000623228 1824 ntBASIC21.53■■□□□ 1.04
NLRP3Q96P20 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.53■■□□□ 1.04
NLRP3Q96P20 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 TSEN15P1-201ENST00000423257 515 ntBASIC21.53■■□□□ 1.04
NLRP3Q96P20 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.53■■□□□ 1.04
NLRP3Q96P20 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.53■■□□□ 1.04
NLRP3Q96P20 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
NLRP3Q96P20 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 MIR3197-201ENST00000582241 73 ntBASIC21.53■■□□□ 1.04
NLRP3Q96P20 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.53■■□□□ 1.04
NLRP3Q96P20 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NLRP3Q96P20 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NLRP3Q96P20 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.52■■□□□ 1.04
NLRP3Q96P20 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NLRP3Q96P20 AC098818.2-201ENST00000564925 2320 ntBASIC21.52■■□□□ 1.04
NLRP3Q96P20 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NLRP3Q96P20 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NLRP3Q96P20 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NLRP3Q96P20 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms