Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PACRGQ96M98 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PACRGQ96M98 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PACRGQ96M98 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.32□□□□□ -0.28
PACRGQ96M98 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PACRGQ96M98 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.31□□□□□ -0.28
PACRGQ96M98 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 AL161772.1-201ENST00000610494 4412 ntBASIC13.31□□□□□ -0.28
PACRGQ96M98 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PACRGQ96M98 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PACRGQ96M98 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
PACRGQ96M98 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.31□□□□□ -0.28
PACRGQ96M98 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
PACRGQ96M98 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.31□□□□□ -0.28
PACRGQ96M98 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
PACRGQ96M98 AL122018.1-201ENST00000446607 2310 ntBASIC13.31□□□□□ -0.28
PACRGQ96M98 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 TFP1-202ENST00000475455 1573 ntBASIC13.31□□□□□ -0.28
PACRGQ96M98 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PACRGQ96M98 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PACRGQ96M98 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.3□□□□□ -0.28
PACRGQ96M98 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PACRGQ96M98 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.3□□□□□ -0.28
PACRGQ96M98 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.3□□□□□ -0.28
PACRGQ96M98 TSPY21P-201ENST00000433481 731 ntBASIC13.3□□□□□ -0.28
PACRGQ96M98 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
PACRGQ96M98 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.3□□□□□ -0.28
PACRGQ96M98 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.3□□□□□ -0.28
PACRGQ96M98 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.3□□□□□ -0.28
PACRGQ96M98 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.3□□□□□ -0.28
PACRGQ96M98 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.3□□□□□ -0.28
PACRGQ96M98 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PACRGQ96M98 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PACRGQ96M98 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.3□□□□□ -0.28
PACRGQ96M98 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PACRGQ96M98 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PACRGQ96M98 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PACRGQ96M98 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms