Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 INGX-201ENST00000359239 846 ntBASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ECEL1P2-202ENST00000465689 757 ntBASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 FAM87A-204ENST00000613235 858 ntBASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 AC018695.7-201ENST00000624587 2492 ntBASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 BX276092.7-203ENST00000637198 1536 ntBASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 NFIC-211ENST00000641145 8399 ntBASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FOXRED1Q96CU9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 KRT89P-201ENST00000620027 1478 ntBASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 AP000523.1-201ENST00000398242 1049 ntBASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
FOXRED1Q96CU9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 AC009947.2-201ENST00000444014 672 ntBASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXRED1Q96CU9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms