Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS1Q92902 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HPS1Q92902 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS1Q92902 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.12■□□□□ 0.17
HPS1Q92902 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HPS1Q92902 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
HPS1Q92902 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.12■□□□□ 0.17
HPS1Q92902 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS1Q92902 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
HPS1Q92902 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.12■□□□□ 0.17
HPS1Q92902 FAM87A-204ENST00000613235 858 ntBASIC16.12■□□□□ 0.17
HPS1Q92902 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS1Q92902 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
HPS1Q92902 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.12■□□□□ 0.17
HPS1Q92902 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS1Q92902 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS1Q92902 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS1Q92902 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS1Q92902 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HPS1Q92902 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS1Q92902 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 AL512604.3-201ENST00000569583 964 ntBASIC16.11■□□□□ 0.17
HPS1Q92902 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS1Q92902 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS1Q92902 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS1Q92902 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HPS1Q92902 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.11■□□□□ 0.17
HPS1Q92902 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS1Q92902 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS1Q92902 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS1Q92902 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.1■□□□□ 0.17
HPS1Q92902 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HPS1Q92902 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.1■□□□□ 0.17
HPS1Q92902 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.1■□□□□ 0.17
HPS1Q92902 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.1■□□□□ 0.17
HPS1Q92902 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HPS1Q92902 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms