Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 AC004408.2-201ENST00000623613 2777 ntBASIC17.55■□□□□ 0.4
HMGB4Q8WW32 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 AC009336.1-201ENST00000608941 1553 ntBASIC17.55■□□□□ 0.4
HMGB4Q8WW32 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.55■□□□□ 0.4
HMGB4Q8WW32 CNN2P11-201ENST00000429351 262 ntBASIC17.55■□□□□ 0.4
HMGB4Q8WW32 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 AC004877.2-201ENST00000623941 599 ntBASIC17.55■□□□□ 0.4
HMGB4Q8WW32 AC010507.1-201ENST00000633895 436 ntBASIC17.55■□□□□ 0.4
HMGB4Q8WW32 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMGB4Q8WW32 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 BCAR1-209ENST00000546196 1340 ntBASIC17.54■□□□□ 0.4
HMGB4Q8WW32 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 DDX43P3-201ENST00000441064 443 ntBASIC17.54■□□□□ 0.4
HMGB4Q8WW32 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGB4Q8WW32 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 ELL2P1-201ENST00000413990 1906 ntBASIC17.53■□□□□ 0.4
HMGB4Q8WW32 REXO1L9P-201ENST00000604264 2108 ntBASIC17.53■□□□□ 0.4
HMGB4Q8WW32 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 LINC00982-205ENST00000420957 435 ntBASIC17.53■□□□□ 0.4
HMGB4Q8WW32 MKNK2P1-201ENST00000437526 628 ntBASIC17.53■□□□□ 0.4
HMGB4Q8WW32 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 LINC02084-201ENST00000606069 1096 ntBASIC17.53■□□□□ 0.4
HMGB4Q8WW32 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGB4Q8WW32 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.53■□□□□ 0.4
HMGB4Q8WW32 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms