Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 CD63-210ENST00000550776 870 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 C20orf181-201ENST00000623918 480 ntBASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3TC1Q8TE82 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 ACTG1P4-201ENST00000425123 1122 ntBASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 MIR4469-201ENST00000583919 79 ntBASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 AC010507.1-201ENST00000633895 436 ntBASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SH3TC1Q8TE82 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 AC096734.2-201ENST00000562054 433 ntBASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3TC1Q8TE82 AC138028.4-201ENST00000564984 1845 ntBASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 NOC2LP1-202ENST00000452600 2235 ntBASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SH3TC1Q8TE82 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3TC1Q8TE82 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms