Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMC1Q8TDI8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMC1Q8TDI8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMC1Q8TDI8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMC1Q8TDI8 HLA-J-201ENST00000462773 1622 ntBASIC24.43■■□□□ 1.5
TMC1Q8TDI8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 AC103564.2-201ENST00000432853 1299 ntBASIC24.42■■□□□ 1.5
TMC1Q8TDI8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 AC106730.1-201ENST00000566722 1090 ntBASIC24.42■■□□□ 1.5
TMC1Q8TDI8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMC1Q8TDI8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 MIR940-201ENST00000401276 94 ntBASIC24.41■■□□□ 1.5
TMC1Q8TDI8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMC1Q8TDI8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 PMS2P1-201ENST00000431037 1228 ntBASIC24.4■■□□□ 1.5
TMC1Q8TDI8 POLD2P1-201ENST00000511220 997 ntBASIC24.4■■□□□ 1.5
TMC1Q8TDI8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 AC023511.2-201ENST00000618803 211 ntBASIC24.4■■□□□ 1.5
TMC1Q8TDI8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMC1Q8TDI8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 AL049757.1-201ENST00000616842 1596 ntBASIC24.39■■□□□ 1.5
TMC1Q8TDI8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TMC1Q8TDI8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 AL022326.1-202ENST00000641533 845 ntBASIC24.39■■□□□ 1.49
TMC1Q8TDI8 AC107918.4-202ENST00000641623 219 ntBASIC24.39■■□□□ 1.49
TMC1Q8TDI8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 KRT18P55-202ENST00000578578 1546 ntBASIC24.39■■□□□ 1.49
TMC1Q8TDI8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
TMC1Q8TDI8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TMC1Q8TDI8 AC012317.2-201ENST00000623305 2251 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms