Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 FZD10-202ENST00000539839 3282 ntBASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
SMARCC2Q8TAQ2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 KRT18P31-201ENST00000506277 1292 ntBASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMARCC2Q8TAQ2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 PRORSD1P-202ENST00000563365 2154 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 AC125634.1-201ENST00000438758 1403 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 AC007967.3-201ENST00000434308 558 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 AC002558.1-201ENST00000488906 803 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 BNIP3P18-201ENST00000593976 575 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 LINC01711-201ENST00000598340 967 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 AL121894.2-201ENST00000602977 491 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 IFNL4P1-201ENST00000607083 540 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 HTR7P1-202ENST00000624664 4411 ntBASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.53■□□□□ 0.88
SMARCC2Q8TAQ2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 AC012313.1-201ENST00000593393 3059 ntBASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 POM121L3P-201ENST00000419331 1163 ntBASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 UNC93B7-201ENST00000509439 705 ntBASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 AC096582.2-201ENST00000510860 516 ntBASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 AL138831.2-201ENST00000606564 490 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms