Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIML2Q8N7C3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIML2Q8N7C3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 AL596257.1-201ENST00000641463 2694 ntBASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.02■□□□□ 0.31
TRIML2Q8N7C3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 MMP23A-201ENST00000234610 1017 ntBASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 MIR3917-201ENST00000580971 93 ntBASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIML2Q8N7C3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17■□□□□ 0.31
TRIML2Q8N7C3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
TRIML2Q8N7C3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TRIML2Q8N7C3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17■□□□□ 0.31
TRIML2Q8N7C3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIML2Q8N7C3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
TRIML2Q8N7C3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRIML2Q8N7C3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17■□□□□ 0.31
TRIML2Q8N7C3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIML2Q8N7C3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms