Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SCML4Q8N228 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCML4Q8N228 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 RPS2P1-201ENST00000434010 821 ntBASIC18.2■□□□□ 0.5
SCML4Q8N228 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.2■□□□□ 0.5
SCML4Q8N228 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.2■□□□□ 0.5
SCML4Q8N228 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.2■□□□□ 0.5
SCML4Q8N228 AL353135.1-201ENST00000606729 504 ntBASIC18.2■□□□□ 0.5
SCML4Q8N228 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SCML4Q8N228 AC008735.5-201ENST00000623544 497 ntBASIC18.2■□□□□ 0.5
SCML4Q8N228 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.2■□□□□ 0.5
SCML4Q8N228 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.2■□□□□ 0.5
SCML4Q8N228 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SCML4Q8N228 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SCML4Q8N228 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCML4Q8N228 AC067852.2-201ENST00000590513 2313 ntBASIC18.2■□□□□ 0.5
SCML4Q8N228 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.19■□□□□ 0.5
SCML4Q8N228 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.19■□□□□ 0.5
SCML4Q8N228 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 LINC00982-205ENST00000420957 435 ntBASIC18.19■□□□□ 0.5
SCML4Q8N228 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.19■□□□□ 0.5
SCML4Q8N228 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.19■□□□□ 0.5
SCML4Q8N228 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.19■□□□□ 0.5
SCML4Q8N228 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SCML4Q8N228 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.19■□□□□ 0.5
SCML4Q8N228 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.19■□□□□ 0.5
SCML4Q8N228 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.19■□□□□ 0.5
SCML4Q8N228 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.19■□□□□ 0.5
SCML4Q8N228 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
SCML4Q8N228 AP001005.1-201ENST00000571755 1248 ntBASIC18.19■□□□□ 0.5
SCML4Q8N228 AC006557.2-201ENST00000592985 1240 ntBASIC18.19■□□□□ 0.5
SCML4Q8N228 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SCML4Q8N228 AL139424.1-201ENST00000607572 797 ntBASIC18.19■□□□□ 0.5
SCML4Q8N228 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.19■□□□□ 0.5
SCML4Q8N228 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SCML4Q8N228 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SCML4Q8N228 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCML4Q8N228 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.19■□□□□ 0.5
SCML4Q8N228 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SCML4Q8N228 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.19■□□□□ 0.5
SCML4Q8N228 LINC00896-202ENST00000609602 2128 ntBASIC18.19■□□□□ 0.5
SCML4Q8N228 AC097637.2-201ENST00000624096 1997 ntBASIC18.19■□□□□ 0.5
SCML4Q8N228 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.19■□□□□ 0.5
SCML4Q8N228 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.18■□□□□ 0.5
SCML4Q8N228 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCML4Q8N228 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCML4Q8N228 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCML4Q8N228 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.18■□□□□ 0.5
SCML4Q8N228 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.18■□□□□ 0.5
SCML4Q8N228 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.18■□□□□ 0.5
SCML4Q8N228 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.18■□□□□ 0.5
SCML4Q8N228 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.18■□□□□ 0.5
SCML4Q8N228 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.18■□□□□ 0.5
SCML4Q8N228 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.18■□□□□ 0.5
SCML4Q8N228 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.18■□□□□ 0.5
SCML4Q8N228 AL133373.2-201ENST00000623187 2828 ntBASIC18.18■□□□□ 0.5
SCML4Q8N228 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
SCML4Q8N228 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCML4Q8N228 LTB4R2-202ENST00000528054 3092 ntBASIC18.18■□□□□ 0.5
SCML4Q8N228 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCML4Q8N228 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SCML4Q8N228 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.17■□□□□ 0.5
SCML4Q8N228 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SCML4Q8N228 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.17■□□□□ 0.5
SCML4Q8N228 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.17■□□□□ 0.5
SCML4Q8N228 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SCML4Q8N228 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SCML4Q8N228 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.17■□□□□ 0.5
SCML4Q8N228 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.17■□□□□ 0.5
SCML4Q8N228 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.17■□□□□ 0.5
SCML4Q8N228 AC073621.1-201ENST00000392730 636 ntBASIC18.17■□□□□ 0.5
SCML4Q8N228 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCML4Q8N228 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.17■□□□□ 0.5
SCML4Q8N228 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms