Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX5Q8N196 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX5Q8N196 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX5Q8N196 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.93■□□□□ 0.46
SIX5Q8N196 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.93■□□□□ 0.46
SIX5Q8N196 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.93■□□□□ 0.46
SIX5Q8N196 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.93■□□□□ 0.46
SIX5Q8N196 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX5Q8N196 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.93■□□□□ 0.46
SIX5Q8N196 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX5Q8N196 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SIX5Q8N196 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX5Q8N196 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX5Q8N196 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX5Q8N196 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SIX5Q8N196 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIX5Q8N196 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.92■□□□□ 0.46
SIX5Q8N196 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIX5Q8N196 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.92■□□□□ 0.46
SIX5Q8N196 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SIX5Q8N196 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.92■□□□□ 0.46
SIX5Q8N196 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.92■□□□□ 0.46
SIX5Q8N196 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIX5Q8N196 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.92■□□□□ 0.46
SIX5Q8N196 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX5Q8N196 LINC00628-201ENST00000628516 1289 ntBASIC17.92■□□□□ 0.46
SIX5Q8N196 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SIX5Q8N196 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX5Q8N196 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.92■□□□□ 0.46
SIX5Q8N196 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SIX5Q8N196 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX5Q8N196 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SIX5Q8N196 AL049757.1-201ENST00000616842 1596 ntBASIC17.91■□□□□ 0.46
SIX5Q8N196 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
SIX5Q8N196 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SIX5Q8N196 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX5Q8N196 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX5Q8N196 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 PTCHD3P3-201ENST00000403073 906 ntBASIC17.91■□□□□ 0.46
SIX5Q8N196 AC005034.1-201ENST00000426657 489 ntBASIC17.91■□□□□ 0.46
SIX5Q8N196 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.91■□□□□ 0.46
SIX5Q8N196 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX5Q8N196 AC023141.5-201ENST00000458585 616 ntBASIC17.91■□□□□ 0.46
SIX5Q8N196 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX5Q8N196 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.91■□□□□ 0.46
SIX5Q8N196 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.91■□□□□ 0.46
SIX5Q8N196 GGTLC5P-201ENST00000617623 998 ntBASIC17.91■□□□□ 0.46
SIX5Q8N196 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.91■□□□□ 0.46
SIX5Q8N196 AL035252.4-201ENST00000624174 288 ntBASIC17.91■□□□□ 0.46
SIX5Q8N196 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.91■□□□□ 0.46
SIX5Q8N196 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SIX5Q8N196 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SIX5Q8N196 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.91■□□□□ 0.46
SIX5Q8N196 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SIX5Q8N196 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIX5Q8N196 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.9■□□□□ 0.46
SIX5Q8N196 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SIX5Q8N196 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms