Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.35■□□□□ 0.21
COL27A1Q8IZC6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 DUX4L17-201ENST00000557360 1267 ntBASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 RARRES2P8-201ENST00000566335 367 ntBASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 AL009183.1-201ENST00000603760 355 ntBASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COL27A1Q8IZC6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
COL27A1Q8IZC6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 UGT1A2P-201ENST00000454886 866 ntBASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 AC079140.1-201ENST00000508039 487 ntBASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 AC069262.1-201ENST00000539058 672 ntBASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 AKAP8P1-201ENST00000434743 1349 ntBASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL27A1Q8IZC6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 AC138028.4-201ENST00000564984 1845 ntBASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms