Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 AL096828.2-201ENST00000567259 1965 ntBASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 TSEN15P1-201ENST00000423257 515 ntBASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 AC074386.1-202ENST00000463561 864 ntBASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 OR7E47P-204ENST00000575924 449 ntBASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 STK25P1-201ENST00000585406 838 ntBASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 AC011467.4-201ENST00000594891 528 ntBASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 GGTLC5P-201ENST00000617623 998 ntBASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEFF1Q8IYR6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 AC138932.1-201ENST00000534164 6830 ntBASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 AC100803.2-201ENST00000562459 1963 ntBASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 AP002414.1-201ENST00000391405 1147 ntBASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 IGHV3-52-201ENST00000519770 353 ntBASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEFF1Q8IYR6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms