Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 ALG1L8P-201ENST00000533887 760 ntBASIC24.66■■□□□ 1.54
UBR1Q8IWV7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 MIR4515-201ENST00000584082 81 ntBASIC24.66■■□□□ 1.54
UBR1Q8IWV7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 HNRNPRP1-201ENST00000453465 1695 ntBASIC24.66■■□□□ 1.54
UBR1Q8IWV7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 KRT8P23-201ENST00000560090 1207 ntBASIC24.66■■□□□ 1.54
UBR1Q8IWV7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 AL020996.1-203ENST00000536896 2307 ntBASIC24.66■■□□□ 1.54
UBR1Q8IWV7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UBR1Q8IWV7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 UXT-AS1-201ENST00000590504 1525 ntBASIC24.65■■□□□ 1.54
UBR1Q8IWV7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 HMGA1P7-201ENST00000406908 502 ntBASIC24.65■■□□□ 1.54
UBR1Q8IWV7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 REXO1L11P-201ENST00000620964 1927 ntBASIC24.65■■□□□ 1.54
UBR1Q8IWV7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UBR1Q8IWV7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 TMPRSS11CP-201ENST00000453277 683 ntBASIC24.64■■□□□ 1.54
UBR1Q8IWV7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UBR1Q8IWV7 AC100757.3-201ENST00000622361 1406 ntBASIC24.64■■□□□ 1.54
UBR1Q8IWV7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 AL596325.1-201ENST00000563991 1082 ntBASIC24.64■■□□□ 1.53
UBR1Q8IWV7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC24.64■■□□□ 1.53
UBR1Q8IWV7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 CR383656.12-201ENST00000549567 513 ntBASIC24.63■■□□□ 1.53
UBR1Q8IWV7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
UBR1Q8IWV7 WASH6P-202ENST00000359512 1437 ntBASIC24.62■■□□□ 1.53
UBR1Q8IWV7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 AL358472.5-202ENST00000641448 1267 ntBASIC24.62■■□□□ 1.53
UBR1Q8IWV7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
UBR1Q8IWV7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms