Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 AC113347.1-201ENST00000413321 391 ntBASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 TSPY12P-201ENST00000421279 868 ntBASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 AC139887.4-201ENST00000607877 719 ntBASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 AC011558.1-201ENST00000623459 338 ntBASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 REXO1L11P-201ENST00000620964 1927 ntBASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC50Q8IVM0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 DDX43P3-201ENST00000441064 443 ntBASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 AL513477.1-201ENST00000602865 2407 ntBASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC50Q8IVM0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 TERF1P1-201ENST00000311003 1181 ntBASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 STARP1-201ENST00000397973 869 ntBASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 YBX1P2-201ENST00000489612 999 ntBASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 AC009154.2-201ENST00000621177 724 ntBASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC50Q8IVM0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms