Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALYREFQ86V81 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALYREFQ86V81 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ALYREFQ86V81 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALYREFQ86V81 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALYREFQ86V81 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALYREFQ86V81 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ALYREFQ86V81 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ALYREFQ86V81 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALYREFQ86V81 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALYREFQ86V81 RBM17P3-201ENST00000417687 1192 ntBASIC18.4■□□□□ 0.54
ALYREFQ86V81 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALYREFQ86V81 OR7E14P-202ENST00000530490 1290 ntBASIC18.4■□□□□ 0.54
ALYREFQ86V81 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 AC005336.2-201ENST00000593183 939 ntBASIC18.4■□□□□ 0.54
ALYREFQ86V81 AC114341.1-201ENST00000618070 349 ntBASIC18.4■□□□□ 0.54
ALYREFQ86V81 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALYREFQ86V81 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALYREFQ86V81 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALYREFQ86V81 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALYREFQ86V81 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALYREFQ86V81 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ALYREFQ86V81 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
ALYREFQ86V81 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ALYREFQ86V81 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ALYREFQ86V81 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.39■□□□□ 0.53
ALYREFQ86V81 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ALYREFQ86V81 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 KRT8P3-201ENST00000519669 1449 ntBASIC18.39■□□□□ 0.53
ALYREFQ86V81 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ALYREFQ86V81 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 GNAS-203ENST00000306120 1878 ntBASIC18.38■□□□□ 0.53
ALYREFQ86V81 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 ELK2BP-201ENST00000415014 1224 ntBASIC18.38■□□□□ 0.53
ALYREFQ86V81 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 AC009053.2-201ENST00000563701 2365 ntBASIC18.38■□□□□ 0.53
ALYREFQ86V81 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALYREFQ86V81 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.38■□□□□ 0.53
ALYREFQ86V81 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALYREFQ86V81 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALYREFQ86V81 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ALYREFQ86V81 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms