Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 AP006294.1-201ENST00000415407 339 ntBASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 AC004790.1-201ENST00000612686 536 ntBASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
RGPD4Q7Z3J3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 AC027307.2-201ENST00000591252 911 ntBASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 AL135999.2-201ENST00000622438 1686 ntBASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.93■■□□□ 1.1
RGPD4Q7Z3J3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 HCG4-201ENST00000418983 998 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 AL031055.1-201ENST00000606362 631 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 AC098614.1-201ENST00000368528 745 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 AL512384.1-201ENST00000406683 331 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 AC092658.1-201ENST00000505836 891 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.92■■□□□ 1.1
RGPD4Q7Z3J3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 MIR346-201ENST00000362234 95 ntBASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 AC142381.1-201ENST00000426099 345 ntBASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 AC132938.2-201ENST00000579188 680 ntBASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RGPD4Q7Z3J3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms