Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.9■□□□□ 0.14
SHFQ7M4L6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 FAM87A-204ENST00000613235 858 ntBASIC15.9■□□□□ 0.14
SHFQ7M4L6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHFQ7M4L6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHFQ7M4L6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
SHFQ7M4L6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
SHFQ7M4L6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.89■□□□□ 0.13
SHFQ7M4L6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 KRT8P9-201ENST00000558927 1449 ntBASIC15.89■□□□□ 0.13
SHFQ7M4L6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 ECEL1P2-202ENST00000465689 757 ntBASIC15.89■□□□□ 0.13
SHFQ7M4L6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 AC113404.2-201ENST00000507884 177 ntBASIC15.89■□□□□ 0.13
SHFQ7M4L6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 LINC01451-201ENST00000623792 534 ntBASIC15.89■□□□□ 0.13
SHFQ7M4L6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.89■□□□□ 0.13
SHFQ7M4L6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHFQ7M4L6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 AC008741.2-201ENST00000612792 3115 ntBASIC15.88■□□□□ 0.13
SHFQ7M4L6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHFQ7M4L6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SHFQ7M4L6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms