Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.08■■□□□ 1.13
COPS6Q7L5N1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 AC046185.3-201ENST00000623228 1824 ntBASIC22.08■■□□□ 1.12
COPS6Q7L5N1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
COPS6Q7L5N1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 AC018845.2-201ENST00000568326 409 ntBASIC22.07■■□□□ 1.12
COPS6Q7L5N1 AC002347.1-201ENST00000569543 541 ntBASIC22.07■■□□□ 1.12
COPS6Q7L5N1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 AC092865.6-201ENST00000642101 219 ntBASIC22.07■■□□□ 1.12
COPS6Q7L5N1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COPS6Q7L5N1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 AL590787.1-201ENST00000568856 1315 ntBASIC22.06■■□□□ 1.12
COPS6Q7L5N1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 AP002414.1-201ENST00000391405 1147 ntBASIC22.06■■□□□ 1.12
COPS6Q7L5N1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 IGLL3P-201ENST00000412472 434 ntBASIC22.06■■□□□ 1.12
COPS6Q7L5N1 ACTG1P4-201ENST00000425123 1122 ntBASIC22.06■■□□□ 1.12
COPS6Q7L5N1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 OR7E47P-204ENST00000575924 449 ntBASIC22.06■■□□□ 1.12
COPS6Q7L5N1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 AL139327.4-201ENST00000612362 153 ntBASIC22.06■■□□□ 1.12
COPS6Q7L5N1 LINC01451-201ENST00000623792 534 ntBASIC22.06■■□□□ 1.12
COPS6Q7L5N1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COPS6Q7L5N1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms