Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PACS1Q6VY07 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.76■□□□□ 0.43
PACS1Q6VY07 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.76■□□□□ 0.43
PACS1Q6VY07 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS1Q6VY07 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.76■□□□□ 0.43
PACS1Q6VY07 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PACS1Q6VY07 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PACS1Q6VY07 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.76■□□□□ 0.43
PACS1Q6VY07 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 NKILA-202ENST00000614771 2598 ntBASIC17.75■□□□□ 0.43
PACS1Q6VY07 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 PCED1CP-201ENST00000419887 785 ntBASIC17.75■□□□□ 0.43
PACS1Q6VY07 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PACS1Q6VY07 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.75■□□□□ 0.43
PACS1Q6VY07 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 AC084018.2-201ENST00000613093 2607 ntBASIC17.74■□□□□ 0.43
PACS1Q6VY07 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 AC068472.1-201ENST00000474589 881 ntBASIC17.74■□□□□ 0.43
PACS1Q6VY07 AC112698.1-201ENST00000510299 916 ntBASIC17.74■□□□□ 0.43
PACS1Q6VY07 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 IER3-202ENST00000376377 1350 ntBASIC17.74■□□□□ 0.43
PACS1Q6VY07 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PACS1Q6VY07 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PACS1Q6VY07 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 AC011676.5-201ENST00000624864 2660 ntBASIC17.73■□□□□ 0.43
PACS1Q6VY07 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 MTCL1P1-201ENST00000446207 792 ntBASIC17.73■□□□□ 0.43
PACS1Q6VY07 RN7SL606P-201ENST00000472779 293 ntBASIC17.73■□□□□ 0.43
PACS1Q6VY07 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PACS1Q6VY07 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 GUSBP12-201ENST00000513727 720 ntBASIC17.73■□□□□ 0.43
PACS1Q6VY07 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.73■□□□□ 0.43
PACS1Q6VY07 AC090616.6-201ENST00000582640 721 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms