Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 AL139327.4-201ENST00000612362 153 ntBASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF549Q6P9A3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF549Q6P9A3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 AC246785.2-201ENST00000432512 513 ntBASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 TSSC2-201ENST00000450217 709 ntBASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF549Q6P9A3 IER3-202ENST00000376377 1350 ntBASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF549Q6P9A3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms