Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.94■□□□□ 0.46
CASC4Q6P4E1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 AC073508.3-201ENST00000619697 1419 ntBASIC17.94■□□□□ 0.46
CASC4Q6P4E1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 AC009053.2-201ENST00000563701 2365 ntBASIC17.93■□□□□ 0.46
CASC4Q6P4E1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 AK4P3-201ENST00000418260 669 ntBASIC17.93■□□□□ 0.46
CASC4Q6P4E1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CASC4Q6P4E1 BX276092.7-203ENST00000637198 1536 ntBASIC17.93■□□□□ 0.46
CASC4Q6P4E1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 AC112907.2-201ENST00000448639 330 ntBASIC17.92■□□□□ 0.46
CASC4Q6P4E1 KRT18P38-201ENST00000449496 1282 ntBASIC17.92■□□□□ 0.46
CASC4Q6P4E1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 GPR32P1-201ENST00000601788 811 ntBASIC17.92■□□□□ 0.46
CASC4Q6P4E1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CASC4Q6P4E1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.91■□□□□ 0.46
CASC4Q6P4E1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASC4Q6P4E1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms