Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 AL031598.1-201ENST00000561511 1773 ntBASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC28.36■■■□□ 2.13
SNAPC4Q5SXM2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 ALG1L8P-201ENST00000533887 760 ntBASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNAPC4Q5SXM2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 HILS1-202ENST00000545329 423 ntBASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 AL161645.1-201ENST00000622716 1255 ntBASIC28.34■■■□□ 2.13
SNAPC4Q5SXM2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 IGHV3-62-201ENST00000520057 340 ntBASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 AL009183.1-201ENST00000603760 355 ntBASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 SPDYE12P-201ENST00000618416 771 ntBASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC28.33■■■□□ 2.13
SNAPC4Q5SXM2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
SNAPC4Q5SXM2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 KRT17P7-201ENST00000451704 1104 ntBASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC28.32■■■□□ 2.12
SNAPC4Q5SXM2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 GPR53P-205ENST00000457298 1084 ntBASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC28.31■■■□□ 2.12
SNAPC4Q5SXM2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 PGF-202ENST00000405431 666 ntTSL 5 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 AL135999.2-201ENST00000622438 1686 ntBASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms