Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 AC008687.5-201ENST00000593746 558 ntBASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 HLA-J-201ENST00000462773 1622 ntBASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SH2D4BQ5SQS7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
SH2D4BQ5SQS7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SH2D4BQ5SQS7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SH2D4BQ5SQS7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SH2D4BQ5SQS7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
SH2D4BQ5SQS7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 NKILA-202ENST00000614771 2598 ntBASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SH2D4BQ5SQS7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 AC011676.5-201ENST00000624864 2660 ntBASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 TSPY14P-201ENST00000303979 915 ntBASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 INGX-201ENST00000359239 846 ntBASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 AC009947.2-201ENST00000444014 672 ntBASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SH2D4BQ5SQS7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms