Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH1Q08174 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH1Q08174 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH1Q08174 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH1Q08174 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH1Q08174 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH1Q08174 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDH1Q08174 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDH1Q08174 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDH1Q08174 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PCDH1Q08174 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH1Q08174 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH1Q08174 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH1Q08174 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDH1Q08174 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDH1Q08174 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH1Q08174 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH1Q08174 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PCDH1Q08174 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCDH1Q08174 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDH1Q08174 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDH1Q08174 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH1Q08174 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH1Q08174 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.93■□□□□ 0.3
PCDH1Q08174 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDH1Q08174 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 AC116353.5-201ENST00000638148 1699 ntBASIC16.93■□□□□ 0.3
PCDH1Q08174 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH1Q08174 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH1Q08174 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDH1Q08174 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH1Q08174 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDH1Q08174 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH1Q08174 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 IGHV3-47-201ENST00000425060 335 ntBASIC16.92■□□□□ 0.3
PCDH1Q08174 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 IGHV3-52-201ENST00000519770 353 ntBASIC16.92■□□□□ 0.3
PCDH1Q08174 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH1Q08174 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH1Q08174 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.92■□□□□ 0.3
PCDH1Q08174 MIR3180-1-201ENST00000580374 94 ntBASIC16.92■□□□□ 0.3
PCDH1Q08174 MIR3180-3-201ENST00000584616 94 ntBASIC16.92■□□□□ 0.3
PCDH1Q08174 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH1Q08174 NPAP1P7-201ENST00000613027 823 ntBASIC16.92■□□□□ 0.3
PCDH1Q08174 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH1Q08174 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PCDH1Q08174 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDH1Q08174 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDH1Q08174 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDH1Q08174 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH1Q08174 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH1Q08174 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PCDH1Q08174 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
PCDH1Q08174 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms